Package: EpiTest
Title: Test for Gene x Gene Interactions in Bi-Parental Populations
Version: 1.0.0
Authors@R: c(
    person("Simon", "Rio", , "simon.rio@cirad.fr", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-7014-8789")),
    person("Tristan", "Mary-Huard", , "tristan.mary-huard@agroparistech.fr", role = "aut",
           comment = c(ORCID = "0000-0002-3839-9067"))
  )
Description: Provides functions to test for gene x gene interactions in
        a bi-parental population of inbred lines. The data are fitted
        with the mixed linear model described in Rio et al. (2022)
        <doi:10.1101/2022.12.18.520958>, that accounts for gene x gene
        interactions at both the fixed effect and variance levels. The
        package also provides graphical tools to display the gene x
        gene interaction trend at the mean level and the variance
        component analysis.
License: GPL (>= 3)
Depends: R (>= 3.5.0)
Imports: dplyr, ggplot2, ggrepel, magrittr, MM4LMM, purrr, stringr,
        utils
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
NeedsCompilation: no
Packaged: 2026-10-10 14:32:32 UTC; root
Author: Simon Rio [aut, cre] (<https://orcid.org/0000-0001-7014-8789>),
        Tristan Mary-Huard [aut]
        (<https://orcid.org/0000-0002-3839-9067>)
Maintainer: Simon Rio <simon.rio@cirad.fr>
Config/pak/sysreqs: libicu-dev
Repository: https://simonrio.r-universe.dev
Date/Publication: 2022-12-20 11:30:02 UTC
RemoteUrl: https://github.com/cran/EpiTest
RemoteRef: HEAD
RemoteSha: e663b3fb8086ea626842c8ddef026a1877e7dbe2